BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004F03LP1|AL425271
(1021 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig793 865 0.0
3x_Contig1481 337 2e-92
>3x_Contig793
Length = 2190
Score = 865 bits (436), Expect = 0.0
Identities = 454/460 (98%)
Strand = Plus / Plus
Query: 1 gatctgagattttaagcttttgacttcagatttaagacaagaagtaatgttagactcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1731 gatctgagattttaagcttttgacttcagatttaagacaagaagtaatgttagactcctc 1790
Query: 61 gttagatgcctcgttcaacttagattccaattctttgattttggacttgaattctgaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1791 gttagatgcctcgttcaacttagattccaattctttgattttggacttgaattctgaaca 1850
Query: 121 ttcattactcaaattttcacattctttattgagattgacgatttcatcattcaaaataga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1851 ttcattactcaaattttcacattctttattgagattgacgatttcatcattcaaaataga 1910
Query: 181 aatggtttgcttgtcctcttggatttctgaatcagcagattttagcttctgttttaaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1911 aatggtttgcttgtcctcttggatttctgaatcagcagattttagcttctgttttaaatt 1970
Query: 241 tatattctgattctcatactcattcaactgctcacgagtgttttccagttcctgttgagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1971 tatattctgattctcatactcattcaactgctcacgagtgttttccagttcctgttgagc 2030
Query: 301 ttgcttcatttgactgaacacggtcttcatagatgagattttactcaaaagagtgttata 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2031 ttgcttcatttgactgaacacggtcttcatagatgagattttactcaaaatagtgttata 2090
Query: 361 cttcaattcgtactgatctctttcctctttaacacgctgtagatcgttctcctcagaatc 420
||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||
Sbjct: 2091 cttcaattcgtactgatctctttcctcttaaacacgctgtagatctttctcctcataatc 2150
Query: 421 actgtgcggttctgcctctgcattagagtttgttgtggct 460
||||||||||||||||||||||||| | ||||||||||||
Sbjct: 2151 actgtgcggttctgcctctgcattatattttgttgtggct 2190
>3x_Contig1481
Length = 8252
Score = 337 bits (170), Expect = 2e-92
Identities = 177/178 (99%), Gaps = 1/178 (0%)
Strand = Plus / Minus
Query: 819 actctagatttatacgttgtgcagatgaacaagttgtagaaagccaattcatttctttcg 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8252 actctagatttatacgttgtgcagatgaacaagttgtagaaagccaattcatttctttcg 8193
Query: 879 atagtctatatacgtcaacatcgttcgtttttcttcaatctttaaaccaacaatttaaat 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8192 atagtctatatacgtcaacatcgttcgtttttcttcaatctttaaaccaacaatttaaat 8133
Query: 939 gttaaaatcatagaaaaccaggaaaaataccagtaataacgag-acatcgctgataaa 995
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 8132 gttaaaatcatagaaaaccaggaaaaataccagtaataacgagaacatcgctgataaa 8075
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9264
Number of Sequences: 1807
Number of extensions: 9264
Number of successful extensions: 69
Number of sequences better than 1.0e-20: 2
length of query: 1021
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1005
effective length of database: 10,329,639
effective search space: 10381287195
effective search space used: 10381287195
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)